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Genes 13(1), 148.
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(2022) Elucidating Drought-Tolerance Mechanisms in Plant Roots through 1H NMR Metabolomics in Parallel with MALDI-MS, and NanoSIMS Imaging Techniques.
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mBio 13(1), e03714-21.
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(2022) Genome-Resolved Metagenomic Insights into Massive Seasonal Ammonia-Oxidizing Archaea Blooms in San Francisco Bay.
mSystems 7(1), e01270-21.
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(2022) Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park.
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Frontiers in Microbiology 12, 761869.
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(2022) Metagenome-Assembled Genomes from a Microbiome Converting Xylose to Medium-Chain Carboxylic Acids.
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Microbiome 9(1), 15.
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mSystems 6(3), e00537-21.
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(2021) Whole Community Metatranscriptomes and Lipidomes Reveal Diverse Responses Among Antarctic Phytoplankton to Changing Ice Conditions.
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(2021) Dinoflagellates alter their carbon and nutrient metabolic strategies across environmental gradients in the central Pacific Ocean.
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(2010) Phylogenetic and metagenomic analysis of Verrucomicrobia in former agricultural grassland soil.
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(2010) Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates.
Environ Microbiol 12(1), 118-23.
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(2010) Evolutionary relationships of wild hominids recapitulated by gut microbial communities.
PLoS Biol 8(11), e1000546.
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(2010) Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores.
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2008
(2008) Identification of ancient remains through genomic sequencing.
Genome Research 18(8), 1347-1353.
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(2008) Annotation of metagenome short reads using proxygenes.
Bioinformatics 24(16), I7-I13.
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(2008) Toward a standards-compliant genomic and metagenomic publication record.
OMICS 12(2), 157-60.
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(2008) Microbiology - Metagenomics.
Nature 455(7212), 481-483.
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(2008) A bacterial metapopulation adapts locally to phage predation despite global dispersal.
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(2008) Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat.
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(2008) IMG/M: a data management and analysis system for metagenomes.
Nucleic Acids Research 36, D534-D538.
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(2008) Assembly of viral metagenomes from yellowstone hot springs.
Appl Environ Microbiol 74(13), 4164-74.
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(2008) A renaissance for the pioneering 16S rRNA gene.
Curr Opin Microbiol 11(5), 442-6.
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(2008) The airborne metagenome in an indoor urban environment.
PLoS One 3(4), e1862.
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(2008) A novel ecological role of the Firmicutes identified in thermophilic microbial fuel cells.
Isme Journal 2(11), 1146-1156.
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2006
(2006) An experimental metagenome data management and analysis system.
Bioinformatics 22(14), e359-67.
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Active anaerobic methane oxidation and sulfur disproportionation in the deep terrestrial subsurface.
The ISME Journal , 1-11.
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Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs).
The ISME Journal , 1-15.
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The endosymbiotic box of protective tricks.
Nature Reviews Microbiology 20(5), 255-255.
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Small partners, big impacts.
Nature Reviews Microbiology 20(3), 127-127.
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