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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in … approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and … research.  These efforts include exploration of the global diversity of alternative genetic codes (Science …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of … viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure … recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … still limited. One key challenge is to complement diversity surveys ( Who is there? ) with activity measurements ( Who … this question in natural soil ecosystems by combining metagenomics with other omics approaches, including …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Reach the next generation of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … Our research focuses on the assembly of metagenomic sequence data … from labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher active microbial functions …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses … microbial ecosystems.  The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to … effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated …
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Publications
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Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the … All proposals will be externally peer-reviewed for scientific merit, … about the general review process or get details on the internal synthetic biology review process .  … Proposers are encouraged to review the JGI’s sample requirements . …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. Users conduct experiments in their own labs or collect field samples. Depending on the …
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