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The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research …

… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and …

… still persists to date. Research Team    … Phylogenetic diversity estimates show that the gap between cultivated and … N. C., Koonin E. V., Woyke T . Giant viruses with an expanded complement of translation system components.” … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature … 5 (1), 1-6 Schulz et al. (2017) Giant viruses with an expanded complement of translation system components. …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet technology in order …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … evolution, and ecosystems. Sequencing technologies have expanded viral diversity knowledge, enabling global …

Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …