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JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in … families, and pathways, enhancing our understanding of evolutionary diversification and microbial diversity. Learn …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds …

ActDES, which is a curated database of actinobacteria for evolutionary studies, and hopefully we can catch him again … without paying attention to the evolutionary biological relationships from which they were taken away. Now things … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines …

… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … possible roles in the environment, establish phylogenetic relationships and to provide valuable reference genomes in … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … Ivanova N. et al. (2014) Stop Codon Reassignments in the Wild. Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …