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Environmental Genomics Group
… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties …
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Publication Policy
… research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … diversity and metabolic potential, with implications for energy production, environmental sustainability, and …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … and bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments … and products to our users. This includes scaling the technologies and enabling state-of-the-art sample processing …   Overview of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. …
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New Lineages of Life Group
… viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … giant viruses, which challenge our understanding of viral complexity and evolution Our research focuses on discovering … insights into viral evolution and complexity, and encode for a treasure trove full of novel genes ready to be tapped …
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Industry Engagement Program
… Facilities — as well as their resources. It will identify high-value partnerships among members that catalyze data … and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance … access to our vast set of resources:  JGI sequencing technologies include scaling technologies and …
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Data Policy
… Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … all user projects accepted FY22 and later through the Community Science Program (CSP), Facilities Integrating …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … research proposal.  Successful applications will focus on high-risk/high-payoff proposals within the focused topic … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 18: A CSP Primer
… many microbes. We still we work in plates, right? We’re a high throughput sequencing. We have high throughput sequencing … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … Science Program, or CSP. Important Links: The main page for information about CSPs JGI’s Data Release Policy A …
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Microbiome Data Science Team
… on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major …
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