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… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, … The Metagenome Program focuses on the high-throughput sequencing of …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

… capacity through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … uniquely offers quantitative Stable Isotope Probing (SIP) Metagenomics to the broader scientific community. The …

… synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and … The DNA Synthesis Program plays a central role in advancing functional genomics, focusing on developing … large datasets to explore sequence-function relationships, advancing the discovery of new biosensors for biofuels and …

… and inter-organismal interactions, which are critical for advancing sustainable solutions in agriculture, energy and … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …

… viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … A complete publication list available at Google Scholar. Dutkiewicz, Z. …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … getting those things into a tube, and actually, then, even beyond that, having those things do what we were hoping that …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … interactions. The  insights derived are crucial for advancing the bioeconomy, environmental sustainability, and … ecosystem functions. The Metabolomics Program focuses on advancing tools and technologies to analyze metabolites in …

… biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable energy sources and … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is advancing research into plant-microbiome interactions, …