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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for …

… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use … and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now … that I’m fascinated to learn more about. He works with methylotrophs, which are a group of carbon-fixing bacteria … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… “Adopt a Genome” is an informal program for faculty to … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address … climate and soil conditions around the globe to identify genes to improve our domesticated species.  The program … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … in most fungi, biosynthetic gene clusters, which are the genes that do the biosynthesis of a secondary metabolite, …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … although it’s practically the same compound but with a methyl group on it or something. But it has a very different …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … work. And that it involves some of these crazy genes, some of these enormous genes that encode these very …

… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A … organisms actually have quite a few antibiotic-resistant genes in there. And so we’re trying to use those as … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …