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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … The Microbial Program focuses on using advanced sequencing …
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Publications
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic … Exploring the fascinating world of giant viruses, which challenge our understanding of viral … Understanding the complex relationships between microbes and …
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Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these …
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Natural Prodcast Episode 18: A CSP Primer
… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity … including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint … identified just a small subset of transcripts up-regulated during toxin-inducing conditions. So that was pretty cool. … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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