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… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … The Metagenome Program focuses on the high-throughput sequencing of …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … to a better understanding of microbial communities and ecosystem function.  The Environmental Genomics group also …

… published. The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a connected resource where data from … the development of tools and infrastructure for microbiome data science, and the development of new informatics tools … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …

… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … in management, processing and visualization of “big data,” and artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in energy, agriculture and ecosystem management. …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support … NOTICE The Data Portal application has replaced the JGI Genome Portal . Book a session via the appointment calendar …

… cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

… The JGI supports the entire data life cycle — from experimental design to reuse. Armed with the high-quality data we generate, tools like artificial intelligence can … with our partners to build infrastructure in support of new analysis techniques.  …

… ensure U.S. energy dominance by integrating supercomputers, datasets and AI agents to solve key national challenges. The … and environmental samples by using advanced computer analysis coupled with liquid chromatography mass … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …