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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … for very large-scale single genomes, based on the JGI assembly tool meraculous. It is now available for both …
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Partnerships: Adopt-A-Genome
… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Publications
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Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … the JGI went on to advance basic science by sequencing scores of microbial species as well as several model … critical minerals and materials. Understand the assembly, function, and the behavior of microbiomes and …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for … falls below these thresholds, you will need to utilize a core facility instead. Proposals may not exceed 10 Tbp …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … their potential applications in the bioeconomy including biofuels, biochemicals and sustainable agriculture. … The …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … often the things that suffer first when it comes to genome assembly. Some of the common biosynthetic systems – like a …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values , which guide the relationships we nurture in …
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Synthesis
Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … : a user science group dedicated to user project design, assembly, and quality control Strain Engineering Group : a … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …
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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based …
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