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… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team …

… of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … cycling and inter-organismal interactions. These insights are crucial for addressing key environmental challenges, … The program also studies giant viruses. Key research areas include terrestrial biogeochemical cycling and …

… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … Exploring the fascinating world of giant viruses, which challenge our understanding of viral … research focuses on discovering and characterizing giant viruses, which possess genomes and particle sizes that rival …

… The JGI’s DNA Synthesis Program supports a wide range of projects, … has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … The DNA Synthesis Program plays a central role in advancing … to address energy and environmental challenges, aligning with the DOE's vision for a sustainable, bio-based economy. …

… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled experimental and …

… encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … functions that shape ecosystems. By decoding the microbial DNA in natural environments, the Program provides a snapshot …

… ensure that all contributors to a research project are appropriately recognized and credited for their work, … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … educators from a broad range of disciplines up-to-speed with some of the latest developments in microbial genomics, …

… Every approved proposal starts with a User Agreement — before any work can begin, including … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …  The recent updates were approved by the DOE to address the DNA Synthesis program. When fully executed, the new User …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … How To Create an Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… quality. Yeah, for sure. NADINE ZIEMERT: Yeah, Dan… it’s a marine actinomycete bacterium. So they look kind of like … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, … of data science in tackling grand challenges in Biology, with a special focus on microbiome research.  These efforts …