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… strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The …

… The purpose of this policy is to establish communication norms around JGI contributions, … JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … JGI staff will provide Users with a list of contributors and their corresponding ORCiD and relevant CRediT …

… data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … provides insights into microbial diversity and metabolic potential, with implications for energy production, …

… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines …

… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …

… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … to predict or just understand better the language of microbial cell-cell communication. And he told us about his … as many different ways as possible to access the chemical potential of these or any organisms. So developing good …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated bacteria, still … gap. A primary goal is to get  insights into the coding potential of candidate phyla  to decipher their possible …