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JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … maximize the impact of user research. The crucial elements are  proposal Award DOI(s), JGI’s ROR ID number, DOE …

… by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, environmental … state-of-the-art instrumentation and informatic approaches.By bridging genomics with metabolomics, the Metabolomics …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … sequence to biological inference. … Genome sequences of key bacterial symbionts of entomopathogenic nematodes: … contact Rekha Seshadri . …       " A lot of our students are working 20, 30, 40 hours a week outside of school . They …

… what you think the terms we should be using for what we do are, and why there and why it’s important to make those … BARONA-GOMEZ: Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … microbial lineages. Charting viral ‘dark matter’:   Viruses are abundant in the biosphere and influence microbial … via IMG/VR and methods to capture  environmental viral populations. Enabling microbiome data science:  The JGI …

… cluster with me because it turns out that oftentimes in bacterial genomes if you have a quorum sensing system or the … could imagine if you have two colonies of bacteria in the soil or something and they’re competing with each other, if … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy … for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in their natural … laboratory isolation and genome sequencing of underexplored bacterial and archaeal lineages that are important for …

… is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Schulz …

… 11 of Natural Prodcast. Alison Takemura: Marnix, where are you right now? Marnix Medema: I’m in my room at home. Or … Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And so yeah, we use antiSMASH to identify … the action of the microbiome because if you sterilize the soil, the protective effect is gone. You can transplant the …