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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … for leading the efforts to do so, and JGI expects acknowledgment (see Auspice Statement below) for the …

Data produced and released by the US Department of Energy … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … the proposal PI and receive permission for their planned work.   … For sequencing or metabolomics projects: data are …

Research in the Woyke laboratory focuses on the utility of single-cell methods … Nature 443, 950-5 (2006). … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

Research in the Eloe-Fadrosh group focuses on using … Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized quantitative … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … and archaea, including those associated with microeukaryotes, enhances our understanding of terrestrial … the functional capability of microbial communities based on their metagenome sequence, in the context of …

To expand access to integrated data, improve tools and … partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development …

… “Adopt a Genome” is an informal program for faculty to … genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

The Metagenome Program uses advanced sequencing technologies to … genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along … pathways, enabling modeling of microbiomes based on functional traits. These advancements provide new …

DAN UDWARY: You’re listening to the Department of Energy … science and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

Biology is currently experiencing a revolution brought on by rapid developments in genomics … and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major transition of … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to … will be improved based on feasibility and scientific merit Assembly, annotation ( Mycocosm ) 256/404 Fungal …

The Fungal &amp; Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … both natural populations and engineered strains. This approach allows for the identification of key functional …