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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI … list. The intent of the JGI-provided list is not for each individual to be included in every publication, but to be …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing of …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing …

… viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … giant viruses, which challenge our understanding of viral complexity and evolution Our research focuses on discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … them, we can promote the health and well-being of not only individual organisms, but collective organisms. DAN UDWARY: … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these … this question in natural soil ecosystems by combining metagenomics with other omics approaches, including …

… The Community Science Program (CSP) provides the scientific … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

… of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. This includes advanced sample … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … substantially increasing efficiency and scalability. Read more about DAP-seq in this science feature. …

… the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … of active groups of organisms within a community. Individual samples are fractionated using a density …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … the JGI. You’re not necessarily required to acknowledge the individuals at the JGI who worked on your project, but you …