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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the …

Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … insights from sequence data, employing IMG data and tools for comparative analysis, visualization and …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis …

… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … ANI is used to ascertain the species specificity of single cells and genomes extracted from metagenomes, and …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … behind phenotypic evolution. It also utilizes advanced tools, including deep learning algorithms for gene … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … endophytes, growth promoters, or pathogens) and as the most efficient degraders of plant biomass. These abilities are … fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. …

… microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI … pipeline that utilizes internal analytical standards to accurately measure environmental microbiome activity …

… opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … Environmental Sample Archives, Applying JGI and EMSL Omics Tools introduces the NEON resource, a network of field …