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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … section, include those DOIs in the supplemental materials for your publication. … Proposal DOIs can be found …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … resource featuring the largest collection of plasmids automatically identified from genomes, metagenomes, and …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus …

… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … as tool building. So I worked with a really great guy named Matt Bogyo in grad school synthesizing activity based probes … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … processes and the bioeconomy including understanding enzymatic transformations, pathways, and how changes in …

I can point people to when it comes to getting out information about both SMC, and Jackie, so please do hop over … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … Genomics call is for projects that translate genomic information into biological function. The  New Investigator and … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … of uncultivated microbial lineages. Charting viral ‘dark matter’:   Viruses are abundant in the biosphere and …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … on multicore and many core architectures with the ultimate objective of facilitating omics-based scientific …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … people were trying to locate and sequence and get the information on biosynthetic gene clusters. And I’ll explain all … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …