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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …

… The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover … microbial ecosystems.  The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong … this question in natural soil ecosystems by combining metagenomics with other omics approaches, including … Multiomics approaches such as metagenomics and metatranscriptomics provide invaluable …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them … Publications … research experience "light" and... they're getting a publication at the end. " — Professor Matt Escobar,  CSU San …

… and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses … from labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher active microbial functions … (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale …

… viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … Cataloging Earth's microbial lineages through advanced genomic techniques and computational analysis: Through cutting-edge genomic techniques and computational …

… and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major transition of … research.  These efforts include exploration of the global diversity of alternative genetic codes (Science … GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. …

… capabilities and functional genomics, scaling capacity through end-to-end automation — and further advancing … a multiplexed DAP-seq (multiDAP-seq) method allowing high-throughput processing of samples in 96-well plates on … activity levels. Learn more about SIP metagenomics through our Micro-Scale Applications group. …

… to as “data” for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), Facilities … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… C., Woyke T . Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri … Selected Publications …