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The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … from environmental samples.  … The IMG/M system serves as a community resource for comparative analysis and annotation …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … allowing connections between all systems to maximize the impact of user research. The crucial elements are  proposal … No. DE-AC02-05CH11231) in collaboration with the user community.” … Read this publication policy in full, …

… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … Program is to develop a deeper understanding of microbial community assembly and microbial interactions, including …

… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The Viral Genomics Group is … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

The Community Science Program (CSP) provides the scientific … synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell . … colitis reveals a disease-associated bacteriophage community.  Nat Microbiol. 3(9):1023-1031 Harrington LB et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … (low nitrogen or low phosphorus), and how cell identity impacts this response. We will eventually construct a … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and … from EcoFAB systems can provide novel insights into the impact of microbial symbionts and their hosts on …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … and professional expertise to support the global research community in studies of complex biological and environmental … genome-enabled understanding of microbial behavior with an impact on the physical, chemical, and geochemical processes …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … the coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …