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Viral Genomics Group
… and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in …
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Publication Policy
… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … of this policy and the lists we provide is to help users understand who contributed to the work, and to identify …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… ActDES, which is a curated database of actinobacteria for evolutionary studies, and hopefully we can catch him again … terms of the definitions, such that everybody could have a understanding of what we’re talking about. And while … mind, that you can really connect what type of evolutionary pressure is simplest. High purifying selection will lead to …
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Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … sustainability, and many other applications. By understanding how microbes contribute to ecosystem … the Program helps drive innovations that could advance our understanding of Earth’s ecosystems. …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem … genomes, which is of fundamental value to improving our understanding of microbial ecology and metabolism by …
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Natural Prodcast Episode 23: Aaron Puri
… these, and Aaron and JGI are working together to try to understand the enzymology of their synthases so that we can … communication. And he told us about his work in inverse stable isotopic labeling, an interesting way to explore … a lot of people who talk about even antibiotics as signals versus growth inhibitory compounds or warfare agents. And …
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Publications
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … of giant viruses, which challenge our understanding of viral complexity and evolution Our research focuses on …
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Institutional User Agreements
… the type of work or specific proposal to be covered under the Agreement. The signing official must have the … to commit your institution or organization to the terms and conditions in the User Agreement.  These include, among … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, …
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