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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …

… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

… cells that are from candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The … Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … from diverse bacterial and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These …

… the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is advancing … descendants of ancestral genes are constructed at key phylogenetic nodes. These families allow easy access to … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… 2024 was a year of first, including the flagship internship program between Alabama Agricultural & Mechanical University and the Joint Genome …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and …

The User Support Analysis group provides computational analysis for new … We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …