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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …
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Publication Policy
… to a research project are appropriately recognized and credited for their work, while also adhering to the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …    Authorship Guidelines JGI will provide all users with a list of JGI staff who contributed to their project, …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, … of data science in tackling grand challenges in Biology, with a special focus on microbiome research.  These efforts …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of … encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and … Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to explore …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … educators from a broad range of disciplines up-to-speed with some of the latest developments in microbial genomics, …
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Microbial Program
… Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … associated with microeukaryotes. The program also studies giant viruses. Key research areas include terrestrial …
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Publications
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How To Use Our Systems
… JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … This allows us to provide diverse scientific communities with large amounts of standardized high-quality data and …
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Giant viruses with an expanded complement of translation system components
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of …
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