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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for …

The Metagenome Program uses advanced sequencing technologies to … diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across …

Data produced and released by the US Department of Energy … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … in scientific publications. … Read more about our data management practices and the resources we provide. … Data …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA … al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

To expand access to integrated data, improve tools and infrastructure as well as ensure … scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …

The JGI Project Management Office carries out a number of activities to … world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes …

The IMG group owns and maintains integral components of JGI’s production … (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial … specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within …

Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … capability of microbial communities based on their metagenome sequence, in the context of reference isolate …

… … Read more about our data management practices and the resources we provide. … Read our research integrity …

… opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … a researcher, briefly describing the project motivation, experimental design, capabilities to be used and DOE mission …