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… archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial …

JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and … with microeukaryotes. The program also studies giant viruses. Key research areas include terrestrial …

… data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating … analysis, JGI scientists are able to link metabolic activity with gene expression, providing deeper insights … state-of-the-art instrumentation and informatic approaches.By bridging genomics with metabolomics, the Metabolomics …

Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including … symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. The program … for key plant species, enhancing our understanding of plant diversity and integrating various data types to explore the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

To expand access to integrated data, improve tools and … Network (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. … of new informatics tools specifically optimized for high-performance computing environments. … KBase is a …

… a different peptide, which might lead you to changes in bioactivity, and new uses for these peptides in medicine or … with animal metabolism itself, and it’s really amazing what diversity there is in animals. I think, even despite the … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature …