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… The Micro-Scale Applications group explores the genetic makeup of natural … of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic … approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … The Metagenome Program focuses on the high-throughput sequencing of …

… The purpose of this policy is to establish communication norms around JGI contributions, ensure … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of … large-scale liquid handling automation, and sequence analysis. … An assay used for profiling transcription factor binding sites across … The JGI uniquely offers quantitative Stable Isotope Probing (SIP) Metagenomics to the …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … communication. And he told us about his work in inverse stable isotopic labeling, an interesting way to explore … Episode Transcript … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… “Adopt a Genome” is an informal program for faculty to … that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from … sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation using public …

… Our research is focused on the discovery and characterization of novel bacterial, archaeal and … viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … Exploring the fascinating world of giant viruses, which challenge our …

… As SIP experiments shed more light on microbial communities … Starting a  few years ago, researchers can request quantitative SIP analysis as a capability in proposal calls … group at the JGI, whose team uses a semi-automated, standardized process to carry out the onerous SIP sample …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … Scientific Program Product Description Deliverables Cycle Time FY25 Q1  …

… DAN UDWARY: You’re listening to the Department of Energy … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … take to improve on the data side of things and sequencing analysis side of things to really start to be able to …