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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … so, and JGI expects acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA …

… the Plant Program is advancing research into plant-microbiome interactions, focusing on how environmental … to evenly sample the diversity of the plant kingdom and allow ancestral reconstructions of plant genomes. With the  … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

Biology is currently experiencing a revolution brought on by rapid developments in … data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Research in the Woyke laboratory focuses on the utility of … N. N., Kelly W. J. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… such as carbon cycling, nutrient cycling, and energy flow. One of the key goals of the Program is to develop a … of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements … via IMG/VR and methods to capture  environmental viral populations. Enabling microbiome data science:  The JGI …

… terrestrial world. Research Team    … Plant microbiomes hold the amazing ability to influence plant … these methods to understand how plant cells respond to low nutrient conditions (low nitrogen or low phosphorus), … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as … from the PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at …

… terrestrial biogeochemical processes, development of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial … and soils. Through a combination of experimental workflows and computational analysis, JGI scientists are able to …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … primary metabolism, that machine learning really would help distinguish and predict novel gene clusters. DAN UDWARY: … that are no longer needed would end up being purged from populations. And that would go for chemistries as well. DAN …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … public datasets.  … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, …

… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … must support the DOE/BER Mission Areas we serve, see below.  … The U.S. Department of Energy (DOE) Joint Genome … DOE science mission areas of bioenergy and environmental microbiome processes.  Among the JGI’s largest dedicated …