Content Tagged "Nikos Kyrpides"
Berkeley Lab’s role in mapping the human microbiome revolves around big data, both analyzing it and making it available for scientists to use worldwide…. Berkeley Lab scientists developed and maintain a comparative analysis system called the Integrated Microbial Genomes and Metagenomes for the Human Microbiome Project (IMG/M HMP). It allows scientists to study the human microbiome… [Read More]
Microbial activity is crucial for breaking down compounds, removing pollutants and chemically transforming organic compounds. Some of these pollutants are polycyclic aromatic hydrocarbons (PAHs) found in contaminated soils. The PAH phenanthrene, for example, can be broken down by the bacterium Arthobacterphenanthrenivorans, which was isolated from a creosote-polluted site in Greece, and used by the microbe… [Read More]
Halophilic bacteria thrive in environments with very high concentrations of salt such as the waters and sediments of salt lakes and saline soils. One of the reasons why the DOE JGI has been sequencing halophiles under the Genomic Encyclopedia of Bacteria and Archaea (GEBA) project and the Community Sequencing Program is because they have salt-adapted… [Read More]
The Centre for Rhizobium Studies, the Australian side of the project led by Dr Wayne Reeve, has the task of sequencing the genomes of rhizobia selected from distinct geographic regions across the globe.The US side of the project will be run at the Joint Genome Institute, led by head of the microbial program Dr Nikos… [Read More]
The December 17 issue of Science includes a special feature called “Insights of the Decade” and two of them feature work done by DOE JGI researchers. (Note: Free registration is required to read the articles online.) Genome research features prominently in Science’s Insights of the Decade list. (DNA helix image by DS from Flickr via… [Read More]
A joint venture has been established between the Centre for Rhizobium Studies (CRS) led by Dr Wayne Reeve at Murdoch University (Australia) and the Joint Genome Institute (JGI, USA) led by the Head of the Microbial Program Dr Nikos Kyrpides to completely decipher the genetic code for 100 geographically distinct root nodule rhizobial strains.’ Read more on the… [Read More]