Berkeley Lab’s role in mapping the human microbiome revolves around big data, both analyzing it and making it available for scientists to use worldwide…. Berkeley Lab scientists developed and maintain a comparative analysis system called the Integrated Microbial Genomes and Metagenomes for the Human Microbiome Project (IMG/M HMP). It allows scientists to study the human microbiome samples within the context of reference genomes of individual microbes. Reference genomes help scientists identify the microbes in a sample.This system is a “data mart” of the larger IMG/M data warehouse that supports the analysis of microbial community genomes at the Department of Energy’s Joint Genome Institute (JGI). IMG/M contains thousands of genomes and metagenome samples with billions of genes. A metagenome consists of the aggregate genomes of all the organisms in a microbial community.
DOE JGI’s IMG/M data system in Berkeley Lab’s release on the Human Microbiome Project
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