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… The Fungal & Algal Program explores the vast diversity of fungi … to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … The Fungal & Algal Program harnesses cutting-edge sequencing technologies and advanced genomic …

… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … of Microbiome . High-throughput stable isotope probing (SIP) proved to vastly reduce labor and improve results. … AMF’s long filaments, or hyphae. This region is called the hyphosphere. By studying its microbial communities, …

… The Fungal & Algal Program Advisory Committee is chartered by …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been …

… The Facilities Integrating Collaborations for User Science (FICUS) call represents … and expertise of multiple DOE National User Facilities in one research proposal.  Successful applications will … Proposals for the annual FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly …

… Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an important …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry based metabolomics Below is a … IMG/M ), binning 154/217 Metagenome Stable Isotope Probing (SIP) Used for the identification of active groups of …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … Plant microbiomes hold the amazing ability to influence plant development, fitness and health. This is a … We are using cutting-edge single-cell profiling methods, including …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …

… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … those nutrients, and even how quickly. But there's a catch: SIP labwork and analysis can be very demanding.  The JGI …

… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, completing a formal User Agreement, … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any approved proposal – including the submission of samples for sequencing, or the …

… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of … technologies available at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …