Results
… research and to help them translate genomic information into biological function. The emphasis is on projects … JGI’s DNA synthesis and ‘omics capabilities to enhance understanding of gene and genome function, particularly … form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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… but-- [LAUGHS] I feel like a lot of people hedge their way into natural products by starting out in synthesis and then … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain … to take a little bit of time. So we are starting with doing DAP-seq and we're hoping I think to get the DAP-seq done in …
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… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of letters … on is known as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan O’Malley , … genomes of different species. This can provide insights into how they orchestrate sets of genes to execute similar …
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… systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems … metabolomics fuels the discovery of novel metabolites, genes, and proteins. It also enables exploration of energy … development of high performance plants and microbes, and understanding microbiome interactions. The insights derived …
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… and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … We then investigate the coding potential to find novel functions that may impact microbiome structure and … viruses and cellular life, providing unique insights into viral evolution and complexity, and encode for a …
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… and bioenergy crop enhancement. The program aims to tap into the largely unexplored biochemical diversity within … conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to … uncover these hidden biochemical resources by exploring the genetic pathways responsible for their synthesis. The …
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… I wanted to start, maybe just by asking you how did you get into the field of natural products? NANCY: Yeah, that’s a … After I got my undergraduate degree, which was in general biology, I joined the Peace Corps. And when I was … out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered… …
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… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in … govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, with … sustainability, and many other applications. By understanding how microbes contribute to ecosystem …
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… work we’ve determined that the ANMG deposits those bacteria into the jelly coat of the eggs. And so these eggs are laid … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to … Have been in the last several years figuring out how to adapt what we want to get out of the mass spectrometer to …
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… And with Christian, I started getting a little bit more into fungi and learning the differences of all the genetic … have no problem living there. So we’re looking at how they adapt to these extreme environments. And then can we use … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …
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… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore … those associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and … challenges, such as improving soil health, carbon sequestration and bioeconomy applications. The program …
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… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they … the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters … have been assembled and reported from metagenomes, our understanding of the impacts of these viruses on microbiome …
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