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Data Ecosystem
… EMSL and the Protein Data Bank enables predictive ecosystem biology. The collaborations present exciting possibilities … with our partners to ensure platforms are future-ready for advancements enabled by artificial intelligence and other tools. By bringing users together through our systems, we build far-reaching communities of researchers to …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom …
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Metabolomics Program
… works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with … and plant responses to environmental changes. With advanced mass spectrometry techniques and computational …
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Who We Are
… researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB … collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data … Institute. We are located in the Integrative Genomics Building in the heart of the Berkeley Lab campus, atop the …
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Mission
… of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale AI-ready data and … in studies of complex biological and environmental systems. We optimize our service to the community through … Our vision is to lead AI-driven genomic innovation to advance biotechnology.   …
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DNA Synthesis Program
… challenges. Through innovative research in synthetic biology, the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and … chromosomes, such as a yeast chromosome project. These advancements contribute to the development of new biofuels …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA synthesis and assembly … technologies including PacBio and Illumina.  The synthetic biology user science group: The applications group is focus …
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Microbial Program
… program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions … The Microbial Program focuses on using advanced sequencing technologies to explore microbial … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …
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Environmental Genomics Group
… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: … tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process automation …
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Plant Program
… The Plant Program advances our understanding of plants’ biological and … mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep learning algorithms for gene … Plant Flagship Genomes are selected through discussion with the JGI Plant …
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Natural Prodcast Episode 9: Roger Linington
… natural products chemistry is one. DAN: So, I’ve always known Roger as an expert in natural product structure … of, actually. DAN:  Absolutely. How do you get started on building a collaborative community like that to do such a … actually produce similar products. So I think we need advancement in sort of both areas. And I suspect that no …
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