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… is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in … data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate …

… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two … led to the development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the … User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … Program focuses on using advanced sequencing technologies to explore microbial diversity — with an emphasis on …

… cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and …

… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of … highlights our skewed understanding of microbial metabolism towards a minority of cultivated bacteria, still persists to … genomes in the public domain, the bulk of which belong to only three phyla. The Woyke group uses single-cell …

… fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile original data for … The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 …

… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … organs that solely house– whose sole function is to house bacterial associates. And so the one that the Hawaiian … an agar plate with a strip of the bacteria down the middle waiting two weeks sometimes for it to grow and then putting …

… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first … about several different pieces of her work, including bacterial quorum sensing and its effects on regulation of … Natural Prodcast episodes  here .   Show Notes Some of the topics we cover in this episode: Synthetic Natural Product …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying … communities and their interactions, the Program aims to unlock the fundamental principles that govern ecosystem …

… New Lineages of Life (NeLLi) Symposium … out where our researchers will be presenting next. Go here to learn about upcoming user-focused webinars and workshops …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … of secondary metabolism.  DAN: Hey there, and welcome to the first episode of Natural Prodcast. First, maybe, a … ALISON: Hmm. It kind of – it’s kind of like I’m smelling bacterial perfume. I mean – but it’s purposeful so it’s some …