Publications

Zhao, Y. et al. (2023) Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.. Molecular Plant-Microbe Interactions. 10.1094/mpmi-07-23-0091-r

Zhong, Z. et al. (2023) Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines. Microbiome. 10.1186/s40168-023-01619-6

Sahu, N. et al. (2023) Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria. Nature Microbiology. 10.1038/s41564-023-01448-1

de Oliveira, C. M. et al. (2023) Trichoderma harzianum transcriptome in response to the nematode Pratylenchus brachyurus. Biological Control. 10.1016/j.biocontrol.2023.105245

Sreedasyam, A. et al. (2023) JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. Nucleic Acids Research. 10.1093/nar/gkad616

Honeker, L. K. et al. (2023) Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest. Nature Microbiology. 10.1038/s41564-023-01432-9

Lagergren, J. et al. (2023) Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa. Plant Phenomics. 10.34133/plantphenomics.0072

Pavia, M. J. et al. (2023) Genes and genome‐resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients. Environmental Microbiology. 10.1111/1462-2920.16469

Esser, S. P. et al. (2023) A predicted CRISPR-mediated symbiosis between uncultivated archaea. Nature Microbiology. 10.1038/s41564-023-01439-2

Back, D. et al. (2023) Identification, Heterologous Expression, and Characterization of the Tolypodiol Biosynthetic Gene Cluster through an Integrated Approach. ACS Chemical Biology. 10.1021/acschembio.3c00225

Yao, T. et al. (2023) Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus. New Phytologist. 10.1111/nph.19126

Madigan, M. T. et al. (2023) Genomic basis for the unique phenotype of the alkaliphilic purple nonsulfur bacterium Rhodobaca bogoriensis. Extremophiles. 10.1007/s00792-023-01304-4