Publications
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Metagenome
Viral
Community Science Program
Coutinho, F. H. et al. (2023) Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities. Microbiome. 10.1186/s40168-023-01547-5
Fungal & Algal
Genomic Technologies
Community Science Program
Carr, E. C. et al. (2023) Characterization of a novel polyextremotolerant fungus, Exophiala viscosa, with insights into its melanin regulation and ecological niche.. G3: Genes, Genomes, Genetics. 10.1093/g3journal/jkad110
Fungal & Algal
Barrett, K. et al. (2023) Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.. Nucleic Acids Research. 10.1093/nar/gkad385
Metagenome
Bioenergy Research Centers
Walters, K. A. et al. (2023) A metagenome-level analysis of a microbial community fermenting ultra-filtered milk permeate. Frontiers in Bioengineering and Biotechnology. 10.3389/fbioe.2023.1173656
DNA Synthesis
Community Science Program
Tian, J. et al. (2023) Leveraging a Structural Blueprint to Rationally Engineer the Rieske Oxygenase TsaM. Biochemistry. 10.1021/acs.biochem.3c00150
Plant
Community Science Program
Woods, D. P. et al. (2023) PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon. PLOS Genetics. 10.1371/journal.pgen.1010706
DNA Synthesis
Community Science Program
Nattermann, M. et al. (2023) Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo. Nature Communications. 10.1038/s41467-023-38072-w
Metagenome
Director's Science, R&D, and Work For Others
Hill, T. C. J. et al. (2023) Resolving the controls over the production and emission of ice-nucleating particles in sea spray. Environmental Science Atmospheres. 10.1039/d2ea00154c
Metagenome
Viral
Community Science Program
EMSL FICUS
Ettinger, C. L. et al. (2023) Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability. Microbiome. 10.1186/s40168-023-01554-6
Metagenome
Community Science Program
Barnett, S. E. et al. (2023) Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling. Environmental Microbiology. 10.1111/1462-2920.16395
Metagenome
Microbial
Volland, J. et al. (2023) Small cells with big secrets. Nature Reviews Microbiology. 10.1038/s41579-023-00903-4
Metagenome
Community Science Program
McGuire, P. M. et al. (2023) Oxic–anoxic cycling promotes coupling between complex carbon metabolism and denitrification in woodchip bioreactors. Environmental Microbiology. 10.1111/1462-2920.16387
