Publications

Diesel, J. et al. (2023) A scaffolded and annotated reference genome of giant kelp (Macrocystis pyrifera). BMC Genomics. 10.1186/s12864-023-09658-x

Mayali, X. et al. (2023) Single-cell isotope tracing reveals functional guilds of bacteria associated with the diatom Phaeodactylum tricornutum. Nature Communications. 10.1038/s41467-023-41179-9

Bieniada, A. et al. (2023) Methane Cycling Microbial Community Characteristics: Comparing Natural, Actively Extracted, Restored and Unrestored Boreal Peatlands. Wetlands. 10.1007/s13157-023-01726-y

Jones, D. T. et al. (2023) Solvent-Producing Clostridia Revisited. Microorganisms. 10.3390/microorganisms11092253

Yuzon, J. D. et al. (2023) Transcriptomic and genomic effects of gamma-radiation exposure on strains of the black yeast Exophiala dermatitidis evolved to display increased ionizing radiation resistance. Microbiology Spectrum. 10.1128/spectrum.02219-23

Zhou, R. et al. (2023) Haplotype‐resolved genome assembly of Populus tremula × P. alba reveals aspen‐specific megabase satellite DNA. The Plant Journal. 10.1111/tpj.16454

Khachaturyan, M. et al. (2023) Worldwide Population Genomics Reveal Long-Term Stability of the Mitochondrial Genome Architecture in a Keystone Marine Plant. Genome Biology and Evolution. 10.1093/gbe/evad167

Kieft, B. et al. (2023) Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater. Nature Communications. 10.1038/s41467-023-40907-5

Bowers, R. M. et al. (2023) Gone with a trace: cataloguing the disappearing gut microbes. Nature Reviews Microbiology. 10.1038/s41579-023-00968-1

Takawira, L. T. et al. (2023) Functional investigation of five R2R3-MYB transcription factors associated with wood development in Eucalyptus using DAP-seq-ML. Plant Molecular Biology. 10.1007/s11103-023-01376-y

Villalobos-Escobedo, J. M. et al. (2023) Genome-wide fitness profiling reveals molecular mechanisms that bacteria use to interact with Trichoderma atroviride exometabolites. PLOS Genetics. 10.1371/journal.pgen.1010909

Simirenko, L. et al. (2023) gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes. Frontiers in Bioengineering and Biotechnology. 10.3389/fbioe.2023.1217811