Publications
Filter BySort By
DNA Synthesis
Community Science Program
Lee, S. H. et al. (2023) Identification of 2‑Hydroxyacyl-CoA Synthases with High Acyloin Condensation Activity for Orthogonal One-Carbon Bioconversion. ACS Catalysis. 10.1021/acscatal.3c02373
Genomic Technologies
Metabolomics
Community Science Program
Caddell, D. et al. (2023) Drought shifts sorghum root metabolite and microbiome profiles and enriches for pipecolic acid. Phytobiomes Journal. 10.1094/pbiomes-02-23-0011-r
Metagenome
Viral
Vik, D. R. et al. (2023) MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets. ISME Communications. 10.1038/s43705-023-00295-9
Metagenome
Community Science Program
Pavia, M. J. et al. (2023) BinaRena: a dedicated interactive platform for human-guided exploration and binning of metagenomes. Microbiome. 10.1186/s40168-023-01625-8
Metagenome
Community Science Program
Zhao, J. et al. (2023) Nitrogen and phosphorous acquisition strategies drive coexistence patterns among archaeal lineages in soil. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/s41396-023-01493-y
Metagenome
Viral
Roux, S. et al. (2023) Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/s41396-023-01468-z
Metabolomics
Harwood, T. V. et al. (2023) BLINK enables ultrafast tandem mass spectrometry cosine similarity scoring. Scientific Reports. 10.1038/s41598-023-40496-9
Fungal & Algal
Genomic Technologies
EMSL FICUS
Li, J. et al. (2023) Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi. Journal of Fungi. 10.3390/jof9080860
Plant
Community Science Program
Davidson, R. B. et al. (2023) Predicted structural proteome of Sphagnum divinum and proteome-scale annotation. Bioinformatics. 10.1093/bioinformatics/btad511
Microbial
Community Science Program
Chiu, B. K. et al. (2023) Membrane lipid and expression responses of Saccharolobus islandicus REY15A to acid and cold stress. Frontiers in Microbiology. 10.3389/fmicb.2023.1219779
Microbial
Shi, Z. J. et al. (2023) Maast: genotyping thousands of microbial strains efficiently. Genome Biology. 10.1186/s13059-023-03030-8
Metagenome
Community Science Program
White, C. et al. (2023) Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios. Frontiers in Microbiology. 10.3389/fmicb.2023.1243410
