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DNA Synthesis Program
… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other … biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. The …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … provided by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated … The Microbial Program focuses on using advanced sequencing technologies to explore microbial …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about … I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … In this episode, Dan and Alison discuss the basics of genome …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The … up heavily of sphagnum mosses.  New research identifies sex chromosomes in the plant and illuminates the significant … (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The Fungal & Algal Program harnesses cutting-edge sequencing technologies and advanced genomic …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … of a microorganism. So around 1985, I said, why aren’t we studying microbes in the ocean? Why don’t we do that? DAN … of the cell. You can see cartoons where you’ll have the chromosomes pulling apart during cell division. And that’s …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … who was the postdoc leading that project. So they were studying this phenomenon called “disease suppression”, where …
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