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… If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, … I got the chance to work with my JGI colleague Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with …

… The CSP New Investigator Call is for investigators and research initiatives new … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP …

… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological … externally peer-reviewed for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, …

… inter-organismal interactions, and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program … any aspect of these mission areas, priority will be given to projects that address the areas of special emphasis that …

… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total* … target is based on 98% of the total available hours.   FY 2021 DOE Metrics There were 2,180 unique* JGI users in … Goal = 89 days; Actual Operation = 76 days due to shelter in place order. †† Operation Goal = 91 days; Actual …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science …

… currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The … and visualization of “big data,” and artificial Intelligent/machine learning approaches in data analysis and … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on …

… is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses … data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of …

… Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics … of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, …

… See below for a list of Frequently Asked Questions about our … successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal …

… See below for examples of successful Letters of Intent to our … Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic … Elucidating Sphagnum microbiome genetic interactions for …