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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi … and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The Fungal & Algal Program harnesses cutting-edge sequencing …
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Project Management Office
… The JGI Project Management Office carries out a number of activities … PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working … formal User Agreement, and ultimately launching the user’s project. See below for details on each step. …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith … You can visit the Products & Offerings section of our website for more details, including a downloadable …
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Projects
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Natural Prodcast Episode 10: A Primer on Genome Mining
… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … And so when I came into graduate school, I worked on that project. And it was working exactly that same kind of way, … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you …
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Fungal & Algal Program User Advisory Committee
… The Fungal & Algal Program Advisory Committee is chartered by … is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the … advisory panel and advocates of Program strategy, operations, and scientific relevance and quality. The Committee …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users … from the public sector: academic and government institutions — with capabilities that had remained largely unknown … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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Partnerships: Myco-Ed
… that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … The Metagenome Program focuses on the high-throughput sequencing of microbial communities …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a … bioproduct applications. The program has completed over 70 projects, including gene synthesis, combinatorial pathway …
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JGI Portals
… new algorithms, models and tools in support of DOE mission priorities. Data discoverability and accessibility are … for further science.  NOTICE The Data Portal application has replaced the JGI Genome Portal . Book a session via the appointment calendar … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality …
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Products
… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry … a table of standard product offerings, including a description of the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all …
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