Publications

Stroud, M. N. R. et al. (2024) Optimized CRISPR Interference System for Investigating Pseudomonas alloputida Genes Involved in Rhizosphere Microbiome Assembly. ACS Synthetic Biology. 10.1021/acssynbio.4c00312

Wyatt, G. et al. (2024) Characterization of switchgrass (Panicum virgatum L.) PvKSL1 as a levopimaradiene/abietadiene‐type diterpene synthase. Plant Biology. 10.1111/plb.13708

Lui, L. M. et al. (2024) Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses. mSystems. 10.1128/msystems.00242-24

Zhang, Y. et al. (2024) Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes. Nature Microbiology. 10.1038/s41564-024-01779-7

Walters, K. A. et al. (2024) Effect of Temperature and pH on Microbial Communities Fermenting a Dairy Coproduct Mixture. Fermentation. 10.3390/fermentation10080422

Zhang, Z. et al. (2024) Orthophosphate uptake onto woodchips in denitrifying bioreactors is enhanced by anoxic-(anaerobic-)oxic cycling. The Science of The Total Environment. 10.1016/j.scitotenv.2024.175515

Wang, X. et al. (2024) Network Topology Evaluation and Transitive Alignments for Molecular Networking. Journal of The American Society for Mass Spectrometry. 10.1021/jasms.4c00208

Jiménez, I. et al. (2024) In silico analysis of the expression profile of AA9 Lytic Polysaccharide Monooxygenases (LPMOs) and the CDH Cellobiose Dehydrogenase enzyme in wood-degrader Agaricomycetes. The Pleurotus ostreatus case. Current Research in Biotechnology. 10.1016/j.crbiot.2024.100244

Tothero, G. K. et al. (2024) Leptothrix ochracea genomes reveal potential for mixotrophic growth on Fe(II) and organic carbon. Applied and Environmental Microbiology. 10.1128/aem.00599-24

Panich, J. et al. (2024) Functional plasticity of HCO3 – uptake and CO2 fixation in Cupriavidus necator H16. Bioresource Technology. 10.1016/j.biortech.2024.131214

Liu, D. et al. (2024) AraR plays a more dominant role than XlnR in plant biomass conversion in Penicillium subrubescens. Current Research in Biotechnology. 10.1016/j.crbiot.2024.100243

Sun, C. L. et al. (2024) Virus ecology and 7‐year temporal dynamics across a permafrost thaw gradient. Environmental Microbiology. 10.1111/1462-2920.16665