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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all … recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated … tools to study this complexity, including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call … request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  Successful … provides customized analysis, the JGI also participates in publication of results. …
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Publications
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Shedding light on spatial structure and dynamics in phototrophic biofilms
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic … metatranscriptomics, to metagenomics and metabolomics data, shedding light on microbial metabolism and activity in …
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Natural Prodcast Episode 23: Aaron Puri
… another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … tundripaludum is my favorite and is again, maybe highlighting the people-centric aspects of the broader field and … “tail of the acyl homoserine lactone” can have different structures, and that is akin to what you’re referring to …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … including especially metatranscriptomics, to better highlight and ultimately predict the main viral impacts in these …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … but then there will be a couple of genes in there where the light bulb will go off, and you’ll understand, oh, those …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … to explore the genetic makeup of microbial communities, shedding light on their roles in various environments and …
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