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… The purpose of this policy is to establish communication norms around JGI contributions, ensure … research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from …

… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … Exploring the fascinating world of giant viruses, which challenge our … insights into viral evolution and complexity, and encode for a treasure trove full of novel genes ready to be tapped …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, … How To Create an Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … While an ever-increasing number of phage and virus genomes have …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Our research focuses on the assembly of metagenomic sequence data … interactions, evolution, and adaptation, ultimately informing strategies for environmental monitoring, …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of … which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams … JGI operates highly scaled short- and long-read sequencing pipelines. This includes advanced sample management (quality …

…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry … to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …