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… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … and work within the DOE emission space of bioenergy, carbon cycling, biogeochemistry, bioproducts. So we cannot …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … enhances our understanding of terrestrial biogeochemical cycling and inter-organismal interactions. These insights … environmental challenges, such as improving soil health, carbon sequestration and bioeconomy applications. The …

… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … about the general review process or get details on the internal synthetic biology review process .  …

… The CSP Functional Genomics call is to enable users to perform … genomics research and to help them translate genomic information into biological function.  The emphasis is on projects … the applicant.  Learn about the general review process or find details on the internal synthetic biology review process …

… projects that address biological functions for biomanufacturing, critical minerals and materials, inter-organismal interactions, and predictive biology, … For the CSP Large Scale call, a Letter of Intent (LOI) is required by the due date printed below. … about the general review process or get details on the internal synthetic biology review process .  …

… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … While an ever-increasing number of phage and virus genomes have been …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better …

… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … Linking lignin engineering to drought stress resilience: …

… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  … target is based on 98% of the total available hours.   FY 2021 DOE Metrics There were 2,180 unique* JGI users in … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though …

… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This research … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …