Publications
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DNA Synthesis
Bioenergy Research Centers
Bioenergy Research Centers
Seo, H. et al. (2023) Rewiring metabolism of Clostridium thermocellum for consolidated bioprocessing of lignocellulosic biomass poplar to produce short-chain esters. Bioresource Technology. 10.1016/j.biortech.2023.129263
Metagenome
Microbial
Wu, D. et al. (2023) A tale of two codes. Nature Reviews Microbiology. 10.1038/s41579-023-00921-2
Plant
Session, A. et al. (2023) Transposon signatures of allopolyploid genome evolution. Nature Communications. 10.1038/s41467-023-38560-z
Microbial
Woyke, T. et al. (2023) Cell by cell: population genetics in the wild. Nature Reviews Genetics. 10.1038/s41576-023-00619-4
Metagenome
Microbial
Viral
Mukherjee, S. et al. (2023) Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute. Journal of the Indian Institute of Science. 10.1007/s41745-023-00365-w
Metagenome
Viral
Community Science Program
Coutinho, F. H. et al. (2023) Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities. Microbiome. 10.1186/s40168-023-01547-5
Genomic Technologies
Microbial
Community Science Program
Community Science Program
Community Science Program
Community Science Program
Community Science Program
Community Science Program
Community Science Program
Community Science Program
Community Science Program
Anstett, J. et al. (2023) A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters. Scientific Data. 10.1038/s41597-023-02222-y
Fungal & Algal
Genomic Technologies
Community Science Program
Carr, E. C. et al. (2023) Characterization of a novel polyextremotolerant fungus, Exophiala viscosa, with insights into its melanin regulation and ecological niche.. G3: Genes, Genomes, Genetics. 10.1093/g3journal/jkad110
Fungal & Algal
Barrett, K. et al. (2023) Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.. Nucleic Acids Research. 10.1093/nar/gkad385
Metagenome
Bioenergy Research Centers
Walters, K. A. et al. (2023) A metagenome-level analysis of a microbial community fermenting ultra-filtered milk permeate. Frontiers in Bioengineering and Biotechnology. 10.3389/fbioe.2023.1173656
DNA Synthesis
Community Science Program
Tian, J. et al. (2023) Leveraging a Structural Blueprint to Rationally Engineer the Rieske Oxygenase TsaM. Biochemistry. 10.1021/acs.biochem.3c00150
Plant
Community Science Program
Woods, D. P. et al. (2023) PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon. PLOS Genetics. 10.1371/journal.pgen.1010706
