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… and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes … in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also built a high-quality …

… Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …

… Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …

… increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  Further analysis led to the identification of …

… cleave the sulfur from gasses, they also produce hydrocarbons, the building blocks of many of our fuels and … beyond that into propanol, propylene, and even larger hydrocarbons that are the staples of our chemical industry,” said … isolate it. The JGI provided a range of constructs based on sequences for MAR enzymes from different organisms to …

… expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …

… metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … the Desert Research Institute. Metagenomic and single-cell sequence data have provided a means to access novel … cataloged and taxonomically classified to date. Under the “sequence to function’ umbrella, this symposium will further …

… 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … culminated in a reference for the complex  sugarcane genome sequence. The JGI  partnered  with synchrotron user … AI clustering algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our …

… collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …