For status information, see the Genome Projects section. For more information about the DOE Office of Science’s Microbial Genome Program, see http://microbialgenomics.energy.gov/. For more information about microbial sequencing at JGI, contact David Bruce.
Strains of Shewanella
| Organism | Est. Genome Size |
|---|---|
| Shewanella baltica OS195 | 5 Mb |
| Shewanella sp. ANA-3 | 5 Mb |
| Shewanella sp. MR-4 | 5 Mb |
| Shewanella sp. MR-7 | 5 Mb |
| Shewanella sp. W3-18-1 | 5 Mb |
| Shewanella baltica OS223 | 5 Mb |
Strains of Chloroflexi
| Organism | Est. Genome Size |
|---|---|
| Chloroflexus aggregans DSM 9485 | 5 Mb |
| Chloroflexus sp. Y-396-1 | 5 Mb |
| Chlorothrix halophila (Candidatus) | 5 Mb |
| Herpetosiphon aurantiacus DSM 785 | 5 Mb |
| Roseiflexus castenholzii HLO8 | 5 Mb |
| Roseiflexus sp. strain RS-1 | 5 Mb |
| Chloroflexus sp. Y-400-fl |
Strains of Rhodopseudomonas palustris
| Organism | Est. Genome Size |
|---|---|
| R. palustris BisA53 | 5.5 Mb |
| R. palustris BisB5 | 4.9 Mb |
| R. palustris BisB18 | 5.5 Mb |
| R. palustris HaA2 | 5.5 Mb |
Organisms Involved in Microbial Arsenic Transformation
| Organism | Est. Genome Size |
|---|---|
| Bacillus selenitireducens MLS-10 | 2-4 Mb |
| Mono Lake Deltaproteobacter MLMS-1 | 6.06 Mb |
| Alkaliphilus oremlandii OhILAs | 2-4 Mb |
| Alkalilimnicola ehrlichei MLHE-1 | 2-4 Mb |
Two species of Micromonas pusilla
| Organism | Est. Genome Size |
|---|---|
| M. pusilla NOUM17(RCC 299) | 15 Mb |
| M. pusilla CCMP1545 | 15 Mb |
Single microbes
| Organism | Est. Genome Size |
|---|---|
| Acidiphilium cryptum JF-5 | 2.46 Mb |
| Acidobacteria bacterium Ellin 345 | 3 Mb |
| Acidothermus cellulolyticus 11B | 6 Mb |
| Actinobacillus succinogenes 130Z | 2 Mb |
| Aspergillus niger | 32 Mb |
| Aureococcus anophagefferens | 32 Mb |
| Bradyrhizobium sp. BTAi1 | 9.2 Mb |
| Burkholderia cepacia AMMD | 7.2 Mb |
| Caldicellulosiruptor saccharolyticus DSM 8903 | 4.3 Mb |
| Candidatus Ruthia magnifica Cm (Proteobacterial symbiont of the clam Calyptogena magnifica) | 4 Mb |
| Dehalococcoides sp. BAV1 | 2 Mb |
| Dehalococcoides sp. VS | 1.5 Mb |
| Desulfotomaculum reducens MI-1 | 4 Mb |
| Flavobacterium johnsoniae UW101 | 6.07 Mb |
| Geobacter sp. FRC-32 | 5 Mb |
| Halorhodospira halophila SL1 | 4 Mb |
| Methanosaeta thermophila PT | 3 Mb |
| Mycobacterium gilvum PYR-GCK | 5 Mb |
| Mycobacterium vanbaalenii PYR-1 | 6.46 Mb |
| Nectria haematococca MPVI | 40 Mb |
| Polaromonas naphthalenivorans CJ2 | 6 Mb |
| Postia Placenta | 40 Mb |
| Pseudoalteromonas atlantica T6c | 3.5 Mb |
| Pseudomonas putida F1 | 6.2 Mb |
| Psychromonas ingrahamii | 4 Mb |
| Xanthobacter autotrophicus Py2 | 5 Mb |
Communities
| Organism |
|---|
| Microbial Population from The Cedars (California) |
| Acid mine drainage community (Iron Mountain, California) |
| Obsidian Hot Spring (Yellowstone: Alicyclobacillus sp., Dictyoglomus turgidum, Geobacillus sp Y412MC61, Geobacillus sp. Y412MC52, Hydrogenobaculum strain Y04AAS1, Mixed Community, Sulfolobus solfataricus 98/2, Sulfurihydrogenibium sp. Y03AOP1, Thermareobacter sp. Y412MC57) |
| PAH Degrading Mycobacteria (Mycobacterium sp. MCS, JLS, and KMS |
| Active methylotroph community from Lake Washington |