The project’s sequencing effort will focus on microorganisms associated with the roots of a common grass species, blue grama, and will interface with ongoing environmental change experiments at the UNM’s Sevilleta Long Term Ecological Research site in central New Mexico. “This award will enable us to better understand the metabolic potential of microbial communities native…
Sandia/JGI grasslands project on Newswise
Sandia researchers and others at the University of New Mexico (UNM), the Joint BioEnergy Institute (JBEI), Novozymes and North Carolina State University’s Center for Integrated Fungal Research (NCSU-CIFR) have received a DNA sequencing award from the Department of Energy Joint Genome Institute (JGI) to study microbial genes in arid grasslands. The research combines interests in…
New IMG tutorial suites
OpenHelix today announced the availability of new tutorial suites on Integrated Microbial Genomes (IMG), Integrated Microbial Genomes with Microbiome Samples (IMG/M), NCBI Viral Genomes and Viral Bioinformatics Resource Center (VBRC). IMG is a data management platform for analyzing microbial genomes sequenced by the Joint Genome Institute (JGI) of the U.S. Department of Energy and including…
Dead zone metagenomic study in Newstrack India
Dead zones are areas of low dissolved-oxygen concentrations caused by climate change that play a major role in the ocean ecosystem and global climate balance because they are a source of greenhouse gases and sinks for nitrogen, robbing many ocean life forms of this critical nutrient. Scientists have observed that the zones – found…
Metagenome study in The Montreal Gazette
There is life in the planet’s expanding dead zones, say researchers, who have uncovered a remarkable microbe thriving in toxic waters off the B.C. coast. The bacteria take up carbon dioxide like a plant, consume sulphide that is deadly to most other life forms, and exhale nitrous oxide which is a potent greenhouse gas. The…
Dead zone microbe on io9
Researchers have mapped the genome of a microbe that thrives in oxygen-deprived areas of the ocean known as “dead zones.” These creatures are increasing, and their ability to live without oxygen might make them perfect space-dwellers. The article, published today in Science, looks at a microbe known as SUPO5, which lives in areas of the…
Dead zone metagenome study on the CBC
Canadian and U.S. researchers have mapped the genome of a microbe that lives in ocean “dead zones,” areas of low-oxygen water that are expanding because of climate change. Researchers at the University of British Columbia and the U.S. Department of Energy say the microbe, called SUP05, is the most abundant organism in these oxygen-minimum zones…
Marine metagenome study in New Kerala
In a new study, a team of scientists has mapped the genome of a microbe that is a key biological indicator of oceanic dead zones. The study was carried out by a team of researchers at the University of British Columbia, along with colleagues at the US Dept. of Energy Joint Genome Institute. “Microbes specialize…
OMZ metagenomic study on redOrbit
In the Oct. 23 issue of the journal Science, researchers from the University of British Columbia and the U.S. Department of Energy Joint Genome Institute (DOE JGI) describe the metagenome of an abundant but uncultivated microbe, known as SUP05, that is silently helping to shape the ecology of [oxygen minimum zones] worldwide. Researchers studied the…
In a new study, a team of scientists has mapped the genome of a microbe that is a key biological indicator of oceanic dead zones. The study was carried out by a team of researchers at the University of British Columbia, along with colleagues at the US Dept. of Energy Joint Genome Institute.