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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … ALISON TAKEMURA: So Nadine, what got you interested in studying natural products? NADINE ZIEMERT: Like almost … really then helps you to get back to, oh, why am I actually studying that question? DAN UDWARY: We know each other I …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… normally do as biologists, which is really just the brain dead kind of blasting for things [laughs and trying to see … like, and then you could characterize it. The classical study that demonstrated this is Challis et al, Chemistry and … or MAGs. So these are genomes that were assembled from metagenomic sequence, metagenomic sequence being taking a …
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Natural Prodcast Episode 20: Brian Bachmann
But we eventually– after testing all these different zones, we eventually settled in on a intermediary zone where … just now switching from intermicrobial interactions, studying intermicrobial interactions by imaging interactions … these everninomicins is that the intellectual property is dead at this point. So no company would ever be interested …
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Metagenome of a Versatile Chemolithoautotroph from Expanding Oceanic Dead Zones
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … quantitative analysis strategy for stable isotope probing metagenomics . mSystems , …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you … and the European corn borer chews that seed and it drops dead. Or birds. Birds are very sensitive to a lot of these …
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … kept looking for open jobs that said, we want a chemist to study the ocean. And I didn’t find a single job … to do something completely new. And that is to begin to study the organic chemistry of life in the sea. And he …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … crack this case, then that would open up our field to other study. And so it was kind of an early example, to try to …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These …
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … also the herbarium curator, so I take care of a museum of dead plants. I’m really good at finding and killing plants, … And for the audience, ethnobotany is the scientific study of the ways that people interact with plants, whether …
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