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… Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors …

… — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. …

… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal contained …

… PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … to the cleanup by continuing to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  …

… genome science capabilities to support BER's mission of achieving a predictive understanding of complex biological, earth, and environmental systems for energy and infrastructure security. In … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …

… and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … While applications will be accepted that address any aspect of these mission areas, priority will be given to projects … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … expanding the known diversity of bacteria and archaea by 44%, is now available and  described November 9, 2020 in  … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Eloe-Fadrosh noted that it was a nice …

… Using the IMG/M data portal, researchers have identified a virus … three domains of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down … similarities with bacterial counterparts suggest the viral versions of the chitosanases originated in bacteria before …

… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The Program aims to better understand the … The work is supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and …

… (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate brands … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … is now available for comparative purposes on the latest version of the JGI plant portal Phytozome at  …