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… increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  …

… isolate it. The JGI provided a range of constructs based on sequences for MAR enzymes from different organisms to …

… expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …

… Registration fees: Regular attendees  (LBNL and external): $400  Industry: $450  Students and postdocs (including LBNL students and … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the …

… M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …

… Nikos Kyrpides  and Simon Roux — features 600 genome sequences for Actinobacteria.  Woyke  was also one of three … .  ID’ing RNA viruses with ease : Searching for RNA sequences within a database can be like combing for the … pipeline that scans specifically for RNA virus sequences, initially using it to comb through more than …

… The work is supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and … mobile genetic elements ( Nature Biotechnology , 2024), and iPHoP , an integrated machine learning framework to … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …

… in our new Strategic Plan , which was released in April 2024 — through serving an increased number of users with a … A record number of primary users — 2,456 — had active proposals with us, along with more than … 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed …

… Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … strains of  Zygnema circumcarinatum . Published  May 2024 in  Nature Genetics by an international research … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …

… retired Naval Commander retires from Berkeley Lab. On June 24, in what was billed as a typical monthly JGI All-Hands …